All functions

TEMULATOR_object

A TEMULATER simulation

clone_f_selection_sweep

Clone frequencies of a sweeping clone at various time points

get_clone_frequency(<temulator_result_object>)

Gets clone fractions from a TEMULATOR result object

get_sequencing_data(<temulator_result_object>)

Gets sequencing data from a TEMULATOR result object

mobster_simulations

150 synthetic sequencing datasets from MOBSTER

mobster_summary_of_simulations

Summary statistics of synthetic sequencing datasets used in MOBSTER

plot(<temulator_result_object>)

Plot method for TEMULATOR result object

print(<temulator_result_object>)

Print method for TEMULATOR result object

samples_selection_sweep

Simulated sequencing data of a sweeping clone at various time points

simulateTumour()

Main function used to produce a simulation

time_series_data_example

Example of a time series dataset for a simulation used in the MOBSTER paper.

validate_temulator_result_object()

Validates a TEMULATOR result object